PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.S092600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 205aa    MW: 21585.9 Da    PI: 5.9239
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.S092600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-183484155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                       + y+GVr+++ +g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  Manes.S092600.1.p 34 PVYRGVRRRS-SGKWVSEIREP-----RrpNRIWLGTFPTPEMAAVAYDVAALALKG 84
                       68*****888.8*********8.....4499***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-113484IPR001471AP2/ERF domain
PROSITE profilePS5103222.9723592IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-203594IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-303594IPR001471AP2/ERF domain
SMARTSM003801.1E-333598IPR001471AP2/ERF domain
CDDcd000182.15E-303694No hitNo description
PRINTSPR003675.8E-113647IPR001471AP2/ERF domain
PRINTSPR003675.8E-117494IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MHYSQPSSSS SNASAAATQL QSSSSTSAVS GRHPVYRGVR RRSSGKWVSE IREPRRPNRI  60
WLGTFPTPEM AAVAYDVAAL ALKGKDAELN FPNSASSLPV PASASSRDIQ AAAASAAAAA  120
GAAGDALGIG SHHHHQEGSN INQTVAQERP MSNEFMDEDL IFDMPNVLMN MAEGMLLSPP  180
RLNITGDESA AAADENPDNL WKFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-143097268ATERF1
3gcc_A3e-143097268ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002528595.24e-80PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR02e-60ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLB9SRH63e-80B9SRH6_RICCO; Dehydration-responsive element-binding protein 1B, putative
STRINGPOPTR_0006s02180.19e-75(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-39ERF family protein